Research workbench
Structure of dc-signr and a portion of repeat domain 8
Analyse Structure of dc-signr and a portion of repeat domain 8 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1XPH
- Type
- protein
- Length
- 139 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- CD209 antigen-like protein 1
- UniProt
- Q9H2X3
- Ligands
- CA
Structure
x-ray diffraction · 1 distinct chain · 24% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | CD209 antigen-like protein 1 | protein | 139 | 24% helix, 29% strand | Q9H2X3 |
Ligands and binding sites
- CA · Calcium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 1XPH · Structure of DC-SIGNR and a portion of repeat domain 8 · the same entry in another collection · chain A against A, TM-score 1.00
- Q9H2X3 · AlphaFold monomer V2.0 prediction for C-type lectin domain family 4 member M (Q9H2X3) · a predicted model of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9H2X3
- Elsewhere: RCSB PDB 1XPH · PDBe 1XPH · UniProt Q9H2X3
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.