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X-ray structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution

Analyse X-ray structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1WQY
Type: DNA
Length: 20 nucleotides
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3'

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	5'-D(CPCPAPTPTPAPAPTPGPG)-3'	dna	10	—	—

Interfaces

1 interface between chains.

A–B · 441 Å² buried · 37 hydrogen bonds · nucleic-nucleic

Compared structures

1WQY · X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 1WQY · PDBe 1WQY

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