MolNFT v2 · #26508 · DNA

X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution

1WQY · 5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3': “X-RAY structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution”. X-ray diffraction at 2. MolNFT v2 #26508 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 1WQY
Type: DNA
Length: 20 nucleotides
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2
Molecule: 5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3'

Structure

x-ray diffraction · resolution 2 · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	5'-D(CPCPAPTPTPAPAPTPGPG)-3'	dna	10	—	—

Interfaces

1 interface between chains.

A–B · 441 Å² buried · 37 hydrogen bonds · nucleic-nucleic

Compared structures

1WQY · X-ray structural analysis of B-DNA decamer D(CCATTAATGG)2 crystal grown in D2O solution · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 1WQY · PDBe 1WQY

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