Research workbench

Recombinant apo-chloroperoxidase from curvularia inaequalis

Analyse Recombinant apo-chloroperoxidase from curvularia inaequalis in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1VNS
Type: protein
Length: 574 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Vanadium chloroperoxidase
EC: 1.11.1.10
UniProt: P49053
Ligands: SO4
Pockets: 6 · best druggability 0.76

Structure

x-ray diffraction · 1 distinct chain · 43% helix, 8% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Vanadium chloroperoxidase (EC 1.11.1.10)	protein	574	43% helix, 8% strand	P49053

Ligands and binding sites

SO4 · Sulfate ion · ion · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1139	0.76	0.78	100	SO4
2	73	0.54	0.86	21	empty
3	148	0.50	0.79	28	empty
4	103	0.36	0.74	23	empty
5	110	0.35	0.73	19	empty

Compared structures

1VNS · Recombinant apo-chloroperoxidase from curvularia inaequalis · the same entry in another collection · chain A against A, TM-score 1.00
P49053 · AlphaFold monomer V2.0 prediction for vanadium chloroperoxidase (P49053) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P49053
Elsewhere: RCSB PDB 1VNS · PDBe 1VNS · UniProt P49053

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