MolNFT v1 · #311989 · protein
AlphaFold monomer V2.0 prediction for vanadium chloroperoxidase (P49053)
P49053: “AlphaFold monomer V2.0 prediction for vanadium chloroperoxidase (P49053)”. 7 pockets (best druggability 0.78). MolNFT v1 #311989 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- P49053
- Type
- protein
- Length
- 609 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x74fa9b3471789AeF6382E089eCD80c4a16336589
- Molecule
- Vanadium chloroperoxidase
- UniProt
- P49053
- Pockets
- 7 · best druggability 0.78
Structure
1 distinct chain · 40% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Vanadium chloroperoxidase | protein | 609 | 40% helix, 8% strand | P49053 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1143 | 0.78 | 0.80 | 102 | empty |
| 2 | 65 | 0.51 | 0.86 | 19 | empty |
| 3 | 176 | 0.44 | 0.74 | 34 | empty |
| 4 | 110 | 0.40 | 0.76 | 18 | empty |
| 5 | 97 | 0.34 | 0.74 | 23 | empty |
Compared structures
- 3BB0 · Crystal structure of a trapped phosphate-intermediate in vanadium apochloroperoxidase… · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 3BB0 · Crystal Structure of a Trapped Phosphate-Intermediate in Vanadium Apochloroperoxidase… · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 1IDU · Crystal structure of the peroxide form of the vanadium-containing chloroperoxidase from… · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 1IDU · Crystal structure of the peroxide form of the vanadium-containing chloroperoxidase from… · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 1VNC · Chloroperoxidase from the fungus curvularia inaequalis · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 1VNC · Chloroperoxidase from the fungus curvularia inaequalis · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 1VNS · Recombinant apo-chloroperoxidase from curvularia inaequalis · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 1VNS · Recombinant apo-chloroperoxidase from curvularia inaequalis · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 1VNF · Chloroperoxidase from the fungus curvularia inaequalis: mutant R360A · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 1VNF · Chloroperoxidase from the fungus curvularia inaequalis: mutant R360A · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 1IDQ · Crystal structure of native vanadium-containing chloroperoxidase from curvularia… · an experimental structure of the same protein · chain A against A, TM-score 0.94
- 1IDQ · Crystal structure of native vanadium-containing chloroperoxidase from curvularia… · an experimental structure of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P49053
- Elsewhere: UniProt P49053 · AlphaFold DB P49053
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