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Crystal structure of putative NADPH-dependent oxidoreductase from mus musculus at 2.10 a resolution

Analyse Crystal structure of putative NADPH-dependent oxidoreductase from mus musculus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1VJ1
Type: protein
Length: 341 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative NADPH-dependent oxidoreductase
UniProt: Q8VDQ1
Pockets: 1 · best druggability 0.68

Structure

x-ray diffraction · 1 distinct chain · 33% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative NADPH-dependent oxidoreductase	protein	341	33% helix, 30% strand	Q8VDQ1

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	705	0.68	0.76	67	empty

Modifications

Observed in the structure: 9 modified (engineered).

Compared structures

1VJ1 · Crystal structure of putative NADPH-dependent oxidoreductase from Mus musculus at 2.10 A… · the same entry in another collection · chain A against A, TM-score 1.00
Q8VDQ1 · AlphaFold monomer V2.0 prediction for prostaglandin reductase 2 (Q8VDQ1) · a predicted model of the same protein · chain A against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8VDQ1
Elsewhere: RCSB PDB 1VJ1 · PDBe 1VJ1 · UniProt Q8VDQ1

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