MolNFT v1 · #318549 · protein
AlphaFold monomer V2.0 prediction for prostaglandin reductase 2 (Q8VDQ1)
Q8VDQ1: “AlphaFold monomer V2.0 prediction for prostaglandin reductase 2 (Q8VDQ1)”. 1 pocket (best druggability 0.83). MolNFT v1 #318549 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q8VDQ1
- Type
- protein
- Length
- 351 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6DAA77C4263E74E745cA9c4D8E291e57e8991Cf5
- Molecule
- Prostaglandin reductase 2
- UniProt
- Q8VDQ1
- Pockets
- 1 · best druggability 0.83
Structure
1 distinct chain · 32% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Prostaglandin reductase 2 | protein | 351 | 32% helix, 28% strand | Q8VDQ1 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 973 | 0.83 | 0.84 | 91 | empty |
Compared structures
- 2ZB3 · Crystal structure of mouse 15-ketoprostaglandin delta-13-reductase in complex with NADPH · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 2ZB3 · Crystal structure of mouse 15-ketoprostaglandin delta-13- reductase in complex with NADPH · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 1VJ1 · Crystal structure of putative NADPH-dependent oxidoreductase from Mus musculus at 2.10 A… · an experimental structure of the same protein · chain A against A, TM-score 0.89
- 1VJ1 · Crystal structure of putative NADPH-dependent oxidoreductase from mus musculus at 2.10 a… · an experimental structure of the same protein · chain A against A, TM-score 0.89
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8VDQ1
- Elsewhere: UniProt Q8VDQ1 · AlphaFold DB Q8VDQ1
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