GL1X · GenesisL1 explorer

Research workbench

CBM6CT from clostridium thermocellum in complex with xylopentaose

Analyse CBM6CT from clostridium thermocellum in complex with xylopentaose in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1UXX
Type
protein
Length
124 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Xylanase U
EC
3.2.1.8
UniProt
O52780
Ligands
XYP, CA

Structure

x-ray diffraction · 1 distinct chain · 2% helix, 62% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
XXylanase U (EC 3.2.1.8)protein1242% helix, 62% strandO52780

Ligands and binding sites

  • XYP · beta-D-xylopyranose · sugar · 5 copies · chains X
  • CA · Calcium ion · metal · chains X

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 1UXX · CBM6ct from Clostridium thermocellum in complex with xylopentaose · the same entry in another collection · chain X against X, TM-score 1.00

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.