Research workbench
Carbohydrate-binding module CBM36 in complex with calcium and xylotriose
Analyse Carbohydrate-binding module CBM36 in complex with calcium and xylotriose in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1UX7
- Type
- protein
- Length
- 119 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Endo-1,4-beta-xylanase D
- UniProt
- P45796
- Ligands
- XYP, CA, SO4
Structure
x-ray diffraction · 1 distinct chain · 3% helix, 62% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Endo-1,4-beta-xylanase D | protein | 119 | 3% helix, 62% strand | P45796 |
Ligands and binding sites
- XYP · beta-D-xylopyranose · sugar · 3 copies · chains A
- CA · Calcium ion · metal · 2 copies · chains A
- SO4 · Sulfate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1UX7 · Carbohydrate-Binding Module CBM36 in complex with calcium and xylotriose · the same entry in another collection · chain A against A, TM-score 1.00
- P45796 · AlphaFold monomer V2.0 prediction for arabinoxylan arabinofuranohydrolase (P45796) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P45796
- Elsewhere: RCSB PDB 1UX7 · PDBe 1UX7 · UniProt P45796
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