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Trypsin specificity as elucidated by lie calculations, X-ray structures and association constant measurements

Analyse Trypsin specificity as elucidated by lie calculations, X-ray structures and… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1UTJ
Type
protein
Length
222 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Trypsin I
EC
3.4.21.4
UniProt
P35031
Ligands
ABN, CA

Structure

x-ray diffraction · 1 distinct chain · 10% helix, 35% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ATrypsin I (EC 3.4.21.4)protein22210% helix, 35% strandP35031

Ligands and binding sites

  • ABN · Benzylamine · ligand · chains A
  • CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 6 disulfide (disulfide).

Compared structures

  • 1UTJ · Trypsin specificity as elucidated by LIE calculations, X-ray structures and association… · the same entry in another collection · chain A against A, TM-score 1.00
  • P35031 · AlphaFold monomer V2.0 prediction for trypsin-1 (P35031) · a predicted model of the same protein · chain A against A, TM-score 1.00

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