Research workbench
Crystal structure of bacillus subtilis yfhh protein : putative transcriptional regulator
Analyse Crystal structure of bacillus subtilis yfhh protein : putative transcriptional… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1SF9
- Type
- protein
- Length
- 118 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Yfhh hypothetical protein
- UniProt
- O31576
- Ligands
- PT, CL
- Pockets
- 1 · best druggability 0.31
Structure
x-ray diffraction · 1 distinct chain · 53% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Yfhh hypothetical protein | protein | 118 | 53% helix, 25% strand | O31576 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 82 | 0.31 | 0.73 | 13 | empty |
Compared structures
- 1SF9 · Crystal Structure of Bacillus subtilis YfhH Protein : Putative Transcriptional Regulator · the same entry in another collection · chain A against A, TM-score 1.00
- O31576 · AlphaFold monomer V2.0 prediction for uncharacterized protein yfhh (O31576) · a predicted model of the same protein · chain A against A, TM-score 0.84
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O31576
- Elsewhere: RCSB PDB 1SF9 · PDBe 1SF9 · UniProt O31576
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