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Crystal structure of subtilisin-propeptide complex

Analyse Crystal structure of subtilisin-propeptide complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1SCJ
Type
protein
Length
346 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Subtilisin E
EC
3.4.21.62
UniProt
P04189
Ligands
CA

Structure

x-ray diffraction · 2 distinct chains · 29% helix, 25% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASubtilisin E (EC 3.4.21.62)protein27530% helix, 21% strandP04189
BSubtilisin E (EC 3.4.21.62)protein7124% helix, 39% strandP04189

Ligands and binding sites

  • CA · Calcium ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 1136 Ų buried · 30 hydrogen bonds · protein-protein

Compared structures

  • 1SCJ · Crystal structure of subtilisin-propeptide complex · the same entry in another collection · chain A against A, TM-score 1.00
  • P04189 · AlphaFold monomer V2.0 prediction for subtilisin E (P04189) · a predicted model of the same protein · chain A against A, TM-score 1.00

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