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Ribonuclease a complex with cytidylic acid (5'CMP) crystallized from 80% ammonium sulphate

Analyse Ribonuclease a complex with cytidylic acid (5'CMP) crystallized from 80%… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1RNM
Type
protein
Length
124 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Ribonuclease a
EC
3.1.27.5
UniProt
P61823
Ligands
C5P, SO4

Structure

x-ray diffraction · 1 distinct chain · 21% helix, 35% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ERibonuclease a (EC 3.1.27.5)protein12421% helix, 35% strandP61823

Ligands and binding sites

  • C5P · Cytidine-5'-monophosphate · ligand · chains E
  • SO4 · Sulfate ion · ion · 3 copies · chains E

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

  • 1RNM · Ribonuclease a complex with cytidylic acid (5'CMP) crystallized from 80% ammonium sulphate · the same entry in another collection · chain E against E, TM-score 1.00

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