Research workbench
Rdc-derived models of the zinc ribbon domain of human general transcription tfiib (zinc bound structures)
Analyse Rdc-derived models of the zinc ribbon domain of human general transcription… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1RLY
- Type
- protein
- Length
- 58 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transcription initiation factor iib
- UniProt
- Q00403
- Ligands
- ZN
Structure
solution nmr · 1 distinct chain · 0% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcription initiation factor iib | protein | 58 | 0% helix, 9% strand | Q00403 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 1RLY · RDC-derived models of the zinc ribbon domain of human general transcription TFIIB (zinc… · the same entry in another collection · chain A against A, TM-score 1.00
- Q00403 · AlphaFold monomer V2.0 prediction for transcription initiation factor iib (Q00403) · a predicted model of the same protein · chain A against A, TM-score 0.48
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q00403
- Elsewhere: RCSB PDB 1RLY · PDBe 1RLY · UniProt Q00403
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