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Calcium-phospholipid binding domain from cytosolic phospholipase A2

Analyse Calcium-phospholipid binding domain from cytosolic phospholipase A2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1RLW
Type
protein
Length
126 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Phospholipase A2
EC
3.1.1.4
UniProt
P47712
Ligands
CD, CA

Structure

x-ray diffraction · 1 distinct chain · 7% helix, 51% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
APhospholipase A2 (EC 3.1.1.4)protein1267% helix, 51% strandP47712

Ligands and binding sites

  • CD · Cadmium ion · metal · 2 copies · chains A
  • CA · Calcium ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 1RLW · Calcium-phospholipid binding domain from cytosolic phospholipase A2 · the same entry in another collection · chain A against A, TM-score 1.00
  • P47712 · AlphaFold monomer V2.0 prediction for cytosolic phospholipase A2 (P47712) · a predicted model of the same protein · chain A against A, TM-score 0.98

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