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Recombinant human interferon-alpha 2B

Analyse Recombinant human interferon-alpha 2B in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1RH2
Type
protein
Length
787 residues
Chains
6
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Interferon-alpha 2B
UniProt
P01563
Ligands
ZN

Structure

x-ray diffraction · 6 distinct chains · 0% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AInterferon-alpha 2Bprotein1450% helix, 0% strandP01563
BInterferon-alpha 2Bprotein1370% helix, 0% strandP01563
CInterferon-alpha 2Bprotein1220% helix, 0% strandP01563
DInterferon-alpha 2Bprotein1310% helix, 0% strandP01563
EInterferon-alpha 2Bprotein1320% helix, 0% strandP01563
FInterferon-alpha 2Bprotein1200% helix, 0% strandP01563

Ligands and binding sites

  • ZN · Zinc ion · metal · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

3 interfaces between chains.

  • A–B · 45 Ų buried · 0 hydrogen bonds · protein-protein
  • C–D · 41 Ų buried · 0 hydrogen bonds · protein-protein
  • E–F · 34 Ų buried · 0 hydrogen bonds · protein-protein

Compared structures

  • 1RH2 · Recombinant human interferon-alpha 2B · the same entry in another collection · chain F against F, TM-score 1.00
  • P01563 · AlphaFold monomer V2.0 prediction for interferon alpha-2 (P01563) · a predicted model of the same protein · chain F against A, TM-score 0.99

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