Research workbench

Low temperature middle resolution structure of P64K from masc data

Analyse Low temperature middle resolution structure of P64K from masc data in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1BHY
Type: protein
Length: 482 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: P64K
UniProt: Q51225
Ligands: FAD
Pockets: 5 · best druggability 0.78

Structure

x-ray diffraction · 1 distinct chain · 34% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	P64K	protein	482	34% helix, 28% strand	Q51225

Ligands and binding sites

FAD · Flavin-adenine dinucleotide · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	804	0.78	0.82	89	FAD
2	234	0.51	0.75	33	empty
3	51	0.36	0.79	14	empty
4	63	0.31	0.75	12	empty
5	59	0.28	0.73	16	empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

1BHY · Low temperature middle resolution structure of P64K from masc data · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q51225
Elsewhere: RCSB PDB 1BHY · PDBe 1BHY · UniProt Q51225

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.