Research workbench
Cryo-EM structure of the histone methyltransferase SET8 bound to H4K20ECX-nucleosome
Analyse Cryo-EM structure of the histone methyltransferase SET8 bound to… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7XPX
- Type
- protein + DNA
- Length
- 1,225 residues
- Chains
- 11
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A310TTQ1, Q6AZJ8, P02281, Q9NQR1
Structure
electron microscopy · 11 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 99 | — | A0A310TTQ1 |
| B | — | protein | 86 | — | — |
| C | — | protein | 108 | — | Q6AZJ8 |
| D | — | protein | 96 | — | P02281 |
| E | — | protein | 98 | — | A0A310TTQ1 |
| F | — | protein | 79 | — | — |
| G | — | protein | 105 | — | Q6AZJ8 |
| H | — | protein | 96 | — | P02281 |
| I | — | dna | 145 | — | — |
| J | — | dna | 145 | — | — |
| K | — | protein | 168 | — | Q9NQR1 |
Compared structures
- 7XPX · Cryo-EM structure of the histone methyltransferase SET8 bound to H4K20Ecx-nucleosome · the same entry in another collection · chain J against J, TM-score 1.00
- Q9NQR1 · AlphaFold monomer V2.0 prediction for N-lysine methyltransferase KMT5A (Q9NQR1) · a predicted model of the same protein · chain K against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A310TTQ1
- Every structure of UniProt Q6AZJ8
- Every structure of UniProt P02281
- Every structure of UniProt Q9NQR1
- Elsewhere: RCSB PDB 7XPX · PDBe 7XPX · UniProt A0A310TTQ1 · UniProt Q6AZJ8 · UniProt P02281 · UniProt Q9NQR1
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