Research workbench
Al-bound structure of the ATALMT1 mutant M60A
Analyse Al-bound structure of the ATALMT1 mutant M60A in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7VOJ
- Type
- protein
- Length
- 800 residues
- Chains
- 2
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Aluminum-activated malate transporter 1
- UniProt
- Q9SJE9
- Ligands
- AL
- Pockets
- 12 · best druggability 0.78
Structure
electron microscopy · 1 distinct chain · 77% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Aluminum-activated malate transporter 1 | protein | 400 | 77% helix, 1% strand | Q9SJE9 |
Ligands and binding sites
- AL · Aluminum ion · metal · 2 copies · chains A, B
- ACY · Acetic acid · additive · 4 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
12 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 910 | 0.78 | 0.81 | 85 | empty |
| 2 | 265 | 0.58 | 0.78 | 34 | empty |
| 3 | 240 | 0.54 | 0.77 | 29 | empty |
| 4 | 141 | 0.52 | 0.80 | 28 | empty |
| 5 | 168 | 0.51 | 0.78 | 25 | empty |
Interfaces
1 interface between chains.
- A–B · 2949 Ų buried · 4 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9SJE9
- Elsewhere: RCSB PDB 7VOJ · PDBe 7VOJ · UniProt Q9SJE9
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.