Research workbench
Protein 4.2 (local refinement from consensus reconstruction of ankyrin complex classes)
Analyse Protein 4.2 (local refinement from consensus reconstruction of ankyrin complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7UZS
- Type
- protein
- Length
- 658 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein 4.2
- UniProt
- P16452
- Pockets
- 7 · best druggability 0.79
Structure
electron microscopy · 1 distinct chain · 18% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| X | Protein 4.2 | protein | 658 | 18% helix, 42% strand | P16452 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 664 | 0.79 | 0.84 | 66 | empty |
| 2 | 297 | 0.71 | 0.84 | 47 | empty |
| 3 | 57 | 0.54 | 0.88 | 22 | empty |
| 4 | 106 | 0.50 | 0.82 | 17 | empty |
| 5 | 238 | 0.50 | 0.75 | 27 | empty |
Compared structures
- 7UZS · Protein 4.2 (local refinement from consensus reconstruction of ankyrin complex classes) · the same entry in another collection · chain X against X, TM-score 1.00
- P16452 · AlphaFold monomer V2.0 prediction for protein 4.2 (P16452) · a predicted model of the same protein · chain X against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P16452
- Elsewhere: RCSB PDB 7UZS · PDBe 7UZS · UniProt P16452
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