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M379A mutant tyrosine phenol-lyase complexed with 3-bromo-dl- phenylalanine

Analyse M379A mutant tyrosine phenol-lyase complexed with 3-bromo-dl- phenylalanine in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7TDL
Type
protein
Length
1,824 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P31013
Ligands
PLP, OY3, K, CL

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B, C, D—protein456—P31013

Ligands and binding sites

  • PLP · Pyridoxal-5'-phosphate · ligand · 3 copies · chains B, C, D
  • OY3 · (4Z)-4-({[(1E)-2-(3-bromophenyl)-1-carboxyethylidene]azaniumyl}methylidene)-2-methyl-5-[(phosphonooxy)methyl]-1,4-dihydropyridin-3-olate · ligand · 2 copies · chains A, B
  • K · Potassium ion · metal · 4 copies · chains A, B, C, D
  • CL · Chloride ion · ion · 3 copies · chains A, B, C, D
  • DMS · Dimethyl sulfoxide · additive · 4 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7TDL · M379A mutant tyrosine phenol-lyase complexed with 3-bromo-DL-phenylalanine · the same entry in another collection · chain A against A, TM-score 1.00
  • P31013 · AlphaFold monomer V2.0 prediction for tyrosine phenol-lyase (P31013) · a predicted model of the same protein · chain A against A, TM-score 0.98

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