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Crystal structure of the complex of CD16A bound by an anti-CD16A Fab

Analyse Crystal structure of the complex of CD16A bound by an anti-CD16A Fab in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7SEG
Type
protein
Length
1,186 residues
Chains
6
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P08637
Ligands
NAG

Structure

x-ray diffraction · 5 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
L, B—protein211——
H—protein214——
A—protein216——
D—protein167—P08637
C—protein167—P08637

Ligands and binding sites

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 5 copies · chains D, C
  • GOL · Glycerol · additive · chains L, H

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7SEG · Crystal structure of the complex of CD16A bound by an anti-CD16A Fab · the same entry in another collection · chain C against C, TM-score 1.00
  • P08637 · AlphaFold monomer V2.0 prediction for low affinity immunoglobulin gamma Fc region… · a predicted model of the same protein · chain D against A, TM-score 0.95

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