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Crystal structure of ARF3 from candida albicans in complex with guanosine-3'-monophosphate-5'-diphosphate

Analyse Crystal structure of ARF3 from candida albicans in complex with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7RLL
Type: protein
Length: 352 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: ARF3P
UniProt: A0A1D8PJ64
Ligands: G3D, MG
Pockets: 2 · best druggability 0.42

Structure

x-ray diffraction · 2 distinct chains · 36% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	ARF3P	protein	175	37% helix, 29% strand	A0A1D8PJ64
B	ARF3P	protein	177	34% helix, 28% strand	A0A1D8PJ64

Ligands and binding sites

G3D · Guanosine-3'-monophosphate-5'-diphosphate · ligand · 2 copies · chains A, B
MG · Magnesium ion · metal · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	122	0.42	0.77	28	empty
2	59	0.29	0.75	17	empty

Interfaces

1 interface between chains.

A–B · 681 Å² buried · 12 hydrogen bonds · protein-protein

Compared structures

7RLL · Crystal structure of ARF3 from Candida albicans in complex with… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A1D8PJ64
Elsewhere: RCSB PDB 7RLL · PDBe 7RLL · UniProt A0A1D8PJ64

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