Ligand · G3D
G3D · Guanosine-3'-monophosphate-5'-diphosphate
G3D, Guanosine-3'-monophosphate-5'-diphosphate (C10 H16 N5 O14 P3, 523.2 g/mol), in the MolNFT structures on GenesisL1: bound in 7 records (6 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and…
- Component
- G3D
- Formula
- C10 H16 N5 O14 P3
- Class
- ligand
- Structures
- 7
- PDB entries
- 6
Binding sites
G3D in 7 structures; the first of them:
- 1MR3 · Saccharomyces cerevisiae ADP-ribosylation Factor 2 (ScArf2) complexed with GDP-3'P at… · G3D F800 · binds LEU25, ASP26, GLY27, ALA28, GLY29, LYS30, THR31, THR32 and 9 more
- 1R8Q · Full-length ARF1-GDP-mg in complex with brefeldin a and a SEC7 domain · G3D A401 · binds LEU25, ASP26, ALA27, ALA28, GLY29, LYS30, THR31, THR32 and 8 more
- 1ZJ6 · Crystal structure of human ARL5 · G3D A190 · binds LEU24, ASP25, ASN26, ALA27, GLY28, LYS29, THR30, THR31 and 9 more
- 2HXS · Crystal Structure of Rab28A GTPase in the Inactive (GDP-3'P-Bound) Form · G3D A401 · binds ASP20, GLY21, ALA22, SER23, GLY24, LYS25, THR26, SER27 and 7 more
- 7RLL · Crystal structure of ARF3 from Candida albicans in complex with… · G3D A201 · binds LEU21, ASP22, ASN23, ALA24, GLY25, LYS26, THR27, THR28 and 9 more
- 8SDW · Crystal structure of the non-myristoylated mutant [L8K]Arf1 in complex with a GDP analogue · G3D A201 · binds LEU25, ASP26, ALA27, ALA28, GLY29, LYS30, THR31, THR32 and 8 more
- 7RLL · Crystal structure of ARF3 from candida albicans in complex with… · G3D A201 · binds LEU21, ASP22, ASN23, ALA24, GLY25, LYS26, THR27, THR28 and 8 more
Residues it binds most
ASP 10, THR 10, ALA 10, LYS 10, ASN 10, LEU 10, GLY 10, ILE 4, CYS 5, VAL 5 (residue and the binding sites it lines).
Found with
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.