Research workbench
Racemic structure of pk-10 and pk-11
Analyse Racemic structure of pk-10 and pk-11 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7QDJ
- Type
- protein
- Length
- 19 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Pk-10+PK-11
- Ligands
- ACE, NA, NH2
Structure
x-ray diffraction · 1 distinct chain · 89% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pk-10+PK-11 | protein | 19 | 89% helix, 0% strand | — |
Ligands and binding sites
- ACE · Acetyl group · ligand · chains A
- NA · Sodium ion · metal · 2 copies
- NH2 · Amino group · ion · chains A
- MLI · Malonate ion · additive
- GOL · Glycerol · additive
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 7 modified, 1 covalent (nonstandard, covalent ligand).
Compared structures
- 7QDJ · Racemic structure of PK-10 and PK-11 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 7QDJ · PDBe 7QDJ
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