Research workbench
Cryo-EM structure of the actomyosin-V complex in the rigor state (central 1ER, young jasp-stabilized F-actin, class 2)
Analyse Cryo-EM structure of the actomyosin-V complex in the rigor state (central 1ER… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7PM1
- Type
- protein
- Length
- 1,261 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P14649, Q02440, P68135
- Ligands
- ADP, 9UE, MG, PO4
Structure
electron microscopy · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 139 | — | P14649 |
| A | — | protein | 751 | — | Q02440 |
| C | — | protein | 371 | — | P68135 |
Ligands and binding sites
- ADP · Adenosine-5'-diphosphate · ligand · chains C
- 9UE · Jasplakinolide · ligand · chains C
- MG · Magnesium ion · metal · chains C
- PO4 · Phosphate ion · ion · chains C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7PM1 · Cryo-EM structure of the actomyosin-V complex in the rigor state (central 1er, young… · the same entry in another collection · chain B against B, TM-score 1.00
- P68135 · AlphaFold monomer V2.0 prediction for actin, alpha skeletal muscle (P68135) · a predicted model of the same protein · chain C against A, TM-score 0.96
- P14649 · AlphaFold monomer V2.0 prediction for myosin light chain 6B (P14649) · a predicted model of the same protein · chain B against A, TM-score 0.95
- Q02440 · AlphaFold monomer V2.0 prediction for unconventional myosin-va (Q02440) · a predicted model of the same protein · chain A against A, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P14649
- Every structure of UniProt Q02440
- Every structure of UniProt P68135
- Elsewhere: RCSB PDB 7PM1 · PDBe 7PM1 · UniProt P14649 · UniProt Q02440 · UniProt P68135
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