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Cryo-EM structure of the actomyosin-V complex in the rigor state (central 1ER)

Analyse Cryo-EM structure of the actomyosin-V complex in the rigor state (central 1ER) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7PLT
Type
protein
Length
1,265 residues
Chains
4
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q02440, P68135, P14649
Ligands
ADP, MG

Structure

electron microscopy · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein747—Q02440
C—protein372—P68135
H—protein7——
B—protein139—P14649

Ligands and binding sites

  • ADP · Adenosine-5'-diphosphate · ligand · chains C
  • MG · Magnesium ion · metal · chains C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7PLT · Cryo-EM structure of the actomyosin-V complex in the rigor state (central 1er) · the same entry in another collection · chain A against A, TM-score 1.00
  • P68135 · AlphaFold monomer V2.0 prediction for actin, alpha skeletal muscle (P68135) · a predicted model of the same protein · chain C against A, TM-score 0.96
  • P14649 · AlphaFold monomer V2.0 prediction for myosin light chain 6B (P14649) · a predicted model of the same protein · chain B against A, TM-score 0.95
  • Q02440 · AlphaFold monomer V2.0 prediction for unconventional myosin-va (Q02440) · a predicted model of the same protein · chain A against A, TM-score 0.94

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