Research workbench
Human methemoglobin bound to staphylococcus aureus hemophore isdb
Analyse Human methemoglobin bound to staphylococcus aureus hemophore isdb in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7PCF
- Type
- protein
- Length
- 968 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P69905, P68871, Q8NX66
- Ligands
- HEM
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 141 | — | P69905 |
| B | — | protein | 146 | — | P68871 |
| E | — | protein | 340 | — | Q8NX66 |
| F | — | protein | 341 | — | Q8NX66 |
Ligands and binding sites
- HEM · Protoporphyrin IX containing Fe · ligand · 2 copies · chains B, F, A, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7PCF · Human methemoglobin bound to Staphylococcus aureus hemophore IsdB · the same entry in another collection · chain A against A, TM-score 1.00
- Q8NX66 · AlphaFold monomer V2.0 prediction for iron-regulated surface determinant protein B… · a predicted model of the same protein · chain E against A, TM-score 0.97
- P69905 · AlphaFold monomer V2.0 prediction for hemoglobin subunit alpha (P69905) · a predicted model of the same protein · chain A against A, TM-score 0.93
- P68871 · AlphaFold monomer V2.0 prediction for hemoglobin subunit beta (P68871) · a predicted model of the same protein · chain B against A, TM-score 0.87
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P69905
- Every structure of UniProt P68871
- Every structure of UniProt Q8NX66
- Elsewhere: RCSB PDB 7PCF · PDBe 7PCF · UniProt P69905 · UniProt P68871 · UniProt Q8NX66
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