Research workbench
Wilavidin biotin complex
Analyse Wilavidin biotin complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7OUQ
- Type
- protein
- Length
- 237 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Wilavidin
- UniProt
- A0A3A4VWA2
- Ligands
- BTN
- Pockets
- 2 · best druggability 0.61
Structure
x-ray diffraction · 2 distinct chains · 1% helix, 58% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Wilavidin | protein | 119 | 3% helix, 58% strand | A0A3A4VWA2 |
| B | Wilavidin | protein | 118 | 0% helix, 58% strand | A0A3A4VWA2 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.61 | 0.88 | 19 | BTN |
| 2 | 99 | 0.58 | 0.85 | 19 | BTN |
Interfaces
1 interface between chains.
- A–B · 1749 Ų buried · 18 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 7OUQ · wilavidin biotin complex · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A3A4VWA2
- Elsewhere: RCSB PDB 7OUQ · PDBe 7OUQ · UniProt A0A3A4VWA2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.