GL1X · GenesisL1 explorer

Research workbench

KIRBAC3.1 L124M mutant

Analyse KIRBAC3.1 L124M mutant in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7N9K
Type
protein
Length
282 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Inward rectifier potassium channel KIRBAC3.1
UniProt
D9N164
Ligands
PCW, TMO, K
Pockets
1 · best druggability 0.34

Structure

x-ray diffraction · 1 distinct chain · 30% helix, 32% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AInward rectifier potassium channel KIRBAC3.1protein28230% helix, 32% strandD9N164

Ligands and binding sites

  • PCW · 1,2-dioleoyl-sn-glycero-3-phosphocholine · ligand · 3 copies · chains A
  • TMO · trimethylamine oxide · ligand · chains A
  • K · Potassium ion · metal · 7 copies · chains A
  • OCT · N-octane · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1590.340.7711PCW

Compared structures

  • 7N9K · KirBac3.1 L124M mutant · the same entry in another collection · chain A against A, TM-score 1.00
  • D9N164 · AlphaFold monomer V2.0 prediction for inward rectifier potassium channel KIRBAC3.1… · a predicted model of the same protein · chain A against A, TM-score 0.94

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.