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Structure of DNA helicase

Analyse Structure of DNA helicase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1PJR
Type: protein
Length: 623 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Pcra
UniProt: P56255
Pockets: 6 · best druggability 0.68

Structure

x-ray diffraction · 1 distinct chain · 53% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Pcra	protein	623	53% helix, 14% strand	P56255

Pockets

6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	637	0.68	0.77	75	empty
2	313	0.61	0.79	35	empty
3	268	0.56	0.77	28	empty
4	117	0.47	0.79	28	empty
5	89	0.45	0.80	18	empty

Compared structures

1PJR · Structure of DNA helicase · the same entry in another collection · chain A against A, TM-score 1.00
P56255 · AlphaFold monomer V2.0 prediction for ATP-dependent DNA helicase pcra (P56255) · a predicted model of the same protein · chain A against A, TM-score 0.75

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P56255
Elsewhere: RCSB PDB 1PJR · PDBe 1PJR · UniProt P56255

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