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Bovine sigma-2 receptor bound to Z4857158944

Analyse Bovine sigma-2 receptor bound to Z4857158944 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7M96
Type: protein
Length: 660 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q3MHW7
Ligands: YTD

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	—	protein	166	—	Q3MHW7
C	—	protein	163	—	Q3MHW7
D	—	protein	165	—	Q3MHW7

Ligands and binding sites

YTD · 6-({[(1S)-1-hydroxy-2-methyl-1-phenylpropan-2-yl]amino}methyl)-1-methyl-3,4-dihydroquinolin-2(1H)-one · ligand · 4 copies · chains A, B, C, D
OLC · (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate · additive · 20 copies · chains A, B, D, C
MES · 2-(N-morpholino)-ethanesulfonic acid · additive · 2 copies · chains A, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7M96 · Bovine sigma-2 receptor bound to Z4857158944 · the same entry in another collection · chain A against A, TM-score 1.00
Q3MHW7 · AlphaFold monomer V2.0 prediction for sigma intracellular receptor 2 (Q3MHW7) · a predicted model of the same protein · chain D against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q3MHW7
Elsewhere: RCSB PDB 7M96 · PDBe 7M96 · UniProt Q3MHW7

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