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Hsa siglec and unique domains in complex with sialyl lewis C

Analyse Hsa siglec and unique domains in complex with sialyl lewis C in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 7KMJ
Type: protein
Length: 204 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Streptococcal hemagglutinin
UniProt: A8AWU7
Ligands: NAG, GAL, SIA, NA

Structure

x-ray diffraction · 1 distinct chain · 12% helix, 33% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Streptococcal hemagglutinin	protein	204	12% helix, 33% strand	A8AWU7

Ligands and binding sites

NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A
GAL · beta-D-galactopyranose · sugar · chains A
SIA · N-acetyl-alpha-neuraminic acid · sugar · chains A
NA · Sodium ion · metal · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7KMJ · Hsa Siglec and Unique domains in complex with Sialyl Lewis C · the same entry in another collection · chain A against A, TM-score 1.00
A8AWU7 · AlphaFold monomer V2.0 prediction for streptococcal hemagglutinin (A8AWU7) · a predicted model of the same protein · chain A against A, TM-score 0.88

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A8AWU7
Elsewhere: RCSB PDB 7KMJ · PDBe 7KMJ · UniProt A8AWU7

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