Research workbench
Crystal structure of K29-linked di-ubiquitin in complex with synthetic antigen binding fragment
Analyse Crystal structure of K29-linked di-ubiquitin in complex with synthetic antigen… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7KEO
- Type
- protein
- Length
- 1,177 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0CG48
- Ligands
- PO4
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 227 | — | — |
| B, F | — | protein | 214 | — | — |
| C | — | protein | 73 | — | P0CG48 |
| D, H | — | protein | 76 | — | P0CG48 |
| E | — | protein | 225 | — | — |
| G | — | protein | 72 | — | P0CG48 |
Ligands and binding sites
- PO4 · Phosphate ion · ion · 6 copies · chains A, B, D, E, F, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7KEO · Crystal structure of K29-linked di-ubiquitin in complex with synthetic antigen binding… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0CG48
- Elsewhere: RCSB PDB 7KEO · PDBe 7KEO · UniProt P0CG48
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