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Crystal structure of ebov glycoprotein with modified HR2 stalk at 2.3A resolution

Analyse Crystal structure of ebov glycoprotein with modified HR2 stalk at 2.3A… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7JPI
Type
protein
Length
374 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q05320
Ligands
NAG, MAN, BMA, PO4

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein249——
B—protein125—Q05320

Ligands and binding sites

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 7 copies · chains A, B
  • MAN · alpha-D-mannopyranose · sugar · 3 copies
  • BMA · beta-D-mannopyranose · sugar
  • PO4 · Phosphate ion · ion · chains A, B
  • GOL · Glycerol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7JPI · Crystal structure of EBOV glycoprotein with modified HR2 stalk at 2.3A resolution · the same entry in another collection · chain A against A, TM-score 1.00

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