Research workbench
Friedel-crafts alkylation enzyme cylk
Analyse Friedel-crafts alkylation enzyme cylk in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7FH6
- Type
- protein
- Length
- 653 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Cylk
- UniProt
- A0A1Y0K711
- Ligands
- CA, MG, CL
- Pockets
- 4 · best druggability 0.80
Structure
x-ray diffraction · 1 distinct chain · 7% helix, 40% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Cylk | protein | 653 | 7% helix, 40% strand | A0A1Y0K711 |
Ligands and binding sites
- CA · Calcium ion · metal · 12 copies · chains A
- MG · Magnesium ion · metal · 3 copies · chains A
- CL · Chloride ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 791 | 0.80 | 0.83 | 67 | CL |
| 2 | 414 | 0.69 | 0.81 | 43 | MG, CA |
| 3 | 83 | 0.34 | 0.75 | 17 | empty |
| 4 | 74 | 0.33 | 0.75 | 16 | empty |
Compared structures
- 7FH6 · Friedel-Crafts alkylation enzyme CylK · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1Y0K711
- Elsewhere: RCSB PDB 7FH6 · PDBe 7FH6 · UniProt A0A1Y0K711
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