Research workbench
De novo design protein D22 with mbp tag
Analyse De novo design protein D22 with mbp tag in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7FBC
- Type
- protein
- Length
- 461 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Maltodextrin-binding PROTEIN,DE novo design protein D22
- UniProt
- A0A4P1LXE0
- Pockets
- 3 · best druggability 0.58
Structure
x-ray diffraction · 1 distinct chain · 51% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Maltodextrin-binding PROTEIN,DE novo design protein D22 | protein | 461 | 51% helix, 16% strand | A0A4P1LXE0 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 352 | 0.58 | 0.76 | 49 | empty |
| 2 | 127 | 0.47 | 0.78 | 24 | empty |
| 3 | 91 | 0.35 | 0.74 | 14 | empty |
Compared structures
- 7FBC · De novo design protein D22 with MBP tag · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A4P1LXE0
- Elsewhere: RCSB PDB 7FBC · PDBe 7FBC · UniProt A0A4P1LXE0
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