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Crystal structure of KRAS-G12D bound to GDP with switch 1 open conformation

Analyse Crystal structure of KRAS-G12D bound to GDP with switch 1 open conformation in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
7F0W
Type
protein
Length
167 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Isoform 2B of GTPase KRAS
EC
3.6.5.2
Ligands
GDP, MG

Structure

x-ray diffraction · 1 distinct chain · 43% helix, 25% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AIsoform 2B of GTPase KRAS (EC 3.6.5.2)protein16743% helix, 25% strand—

Ligands and binding sites

  • GDP · Guanosine-5'-diphosphate · ligand · chains A
  • MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7F0W · Crystal structure of KRAS-G12D bound to GDP with switch 1 open conformation · the same entry in another collection · chain A against A, TM-score 1.00

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