Research workbench
Crystal structure of haloarcula marismortui cheb with glutathione S- transferase expression tag
Analyse Crystal structure of haloarcula marismortui cheb with glutathione S… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7ESG
- Type
- protein
- Length
- 589 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glutathione S-TRANSFERASE,PROTEIN-glutamate METHYLESTERASE/PROTEIN-glutamine glutaminase
- UniProt
- P08515, Q5V0B3
- Pockets
- 10 · best druggability 0.73
Structure
x-ray diffraction · 1 distinct chain · 29% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glutathione S-TRANSFERASE,PROTEIN-glutamate METHYLESTERASE/PROTEIN-glutamine glutaminase | protein | 589 | 29% helix, 3% strand | P08515, Q5V0B3 |
Pockets
10 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 491 | 0.73 | 0.82 | 53 | empty |
| 2 | 105 | 0.69 | 0.92 | 32 | empty |
| 3 | 236 | 0.59 | 0.79 | 32 | empty |
| 4 | 207 | 0.59 | 0.80 | 40 | empty |
| 5 | 105 | 0.57 | 0.84 | 22 | empty |
Compared structures
- 7ESG · Crystal structure of Haloarcula marismortui CheB with Glutathione S-transferase… · the same entry in another collection · chain A against A, TM-score 1.00
- Q5V0B3 · AlphaFold monomer V2.0 prediction for protein-glutamate METHYLESTERASE/PROTEIN-glutamine… · a predicted model of the same protein · chain A against A, TM-score 0.53
- P08515 · AlphaFold monomer V2.0 prediction for glutathione S-transferase class-mu 26 kda isozyme… · a predicted model of the same protein · chain A against A, TM-score 0.16
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P08515
- Every structure of UniProt Q5V0B3
- Elsewhere: RCSB PDB 7ESG · PDBe 7ESG · UniProt P08515 · UniProt Q5V0B3
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