Research workbench
The structure of SWI/SNF-nucleosome complex
Analyse The structure of SWI/SNF-nucleosome complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7EGP
- Type
- protein + DNA
- Length
- 5,016 residues
- Chains
- 21
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P09547, P18480, P32591, P53628, P18888, P43554, P22082, P53330, Q12406, Q05123, P84233, P62799, Q6AZJ8, P02281
- Ligands
- ADP, BEF, MG
Structure
electron microscopy · 19 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | — | protein | 507 | — | P09547 |
| C | — | protein | 351 | — | P18480 |
| D | — | protein | 395 | — | P32591 |
| H | — | protein | 388 | — | P53628 |
| I | — | protein | 106 | — | P18888 |
| J | — | protein | 167 | — | P43554 |
| E | — | protein | 422 | — | P32591 |
| A | — | protein | 750 | — | P22082 |
| L | — | protein | 53 | — | P53330 |
| M | — | protein | 387 | — | Q12406 |
| N | — | protein | 392 | — | Q05123 |
| O | — | protein | 98 | — | P84233 |
| P | — | protein | 87 | — | P62799 |
| Q, U | — | protein | 107 | — | Q6AZJ8 |
| R, V | — | protein | 93 | — | P02281 |
| S | — | protein | 95 | — | P84233 |
| T | — | protein | 86 | — | P62799 |
| W | — | dna | 166 | — | — |
| X | — | dna | 166 | — | — |
Ligands and binding sites
- ADP · Adenosine-5'-diphosphate · ligand · chains A
- BEF · Beryllium trifluoride ion · ligand · chains A
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7EGP · The structure of SWI/SNF-nucleosome complex · the same entry in another collection · chain N against N, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P09547
- Every structure of UniProt P18480
- Every structure of UniProt P32591
- Every structure of UniProt P53628
- Every structure of UniProt P18888
- Every structure of UniProt P43554
- Every structure of UniProt P22082
- Every structure of UniProt P53330
- Every structure of UniProt Q12406
- Every structure of UniProt Q05123
- Every structure of UniProt P84233
- Every structure of UniProt P62799
- Every structure of UniProt Q6AZJ8
- Every structure of UniProt P02281
- Elsewhere: RCSB PDB 7EGP · PDBe 7EGP · UniProt P09547 · UniProt P18480 · UniProt P32591 · UniProt P53628 · UniProt P18888 · UniProt P43554 · UniProt P22082 · UniProt P53330 · UniProt Q12406 · UniProt Q05123 · UniProt P84233 · UniProt P62799 · UniProt Q6AZJ8 · UniProt P02281
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