Complex between YPD1 and SLN1 response regulator domain in space group P2(1)2(1)2(1)

Structure

x-ray diffraction · 2 distinct chains · 54% helix, 8% strand (DSSP).

Ligands and binding sites

• SO4 · Sulfate ion · ion · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Interfaces

1 interface between chains.

• A–B · 1001 Ų buried · 20 hydrogen bonds · protein-protein

Compared structures

• 1OXB · Complex between YPD1 and SLN1 response regulator domain in space group P2(1)2(1)2(1) · the same entry in another collection · chain A against A, TM-score 1.00
• P39928 · AlphaFold monomer V2.0 prediction for osmosensing histidine protein kinase SLN1 (P39928) · a predicted model of the same protein · chain B against A, TM-score 0.98
• Q07688 · AlphaFold monomer V2.0 prediction for phosphorelay intermediate protein YPD1 (Q07688) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q07688
• Every structure of UniProt P39928
• Elsewhere: RCSB PDB 1OXB · PDBe 1OXB · UniProt Q07688 · UniProt P39928