Research workbench
Complex of TRPC4 and CALMODULIN_NLOBE
Analyse Complex of TRPC4 and CALMODULIN_NLOBE in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7CQP
- Type
- protein
- Length
- 95 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Calmodulin-1; Peptide from short transient receptor potential channel 4
- UniProt
- P0DP26, Q9QUQ5
- Ligands
- CA
Structure
x-ray diffraction · 2 distinct chains · 65% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | Calmodulin-1 | protein | 75 | 63% helix, 5% strand | P0DP26 |
| C | Peptide from short transient receptor potential channel 4 | protein | 20 | 75% helix, 0% strand | Q9QUQ5 |
Ligands and binding sites
- CA · Calcium ion · metal · 2 copies · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- B–C · 831 Ų buried · 2 hydrogen bonds · protein-protein
Compared structures
- 7CQP · Complex of TRPC4 and Calmodulin_Nlobe · the same entry in another collection · chain B against B, TM-score 1.00
- P0DP26 · AlphaFold monomer V2.0 prediction for calmodulin-1 (P0DP26) · a predicted model of the same protein · chain B against A, TM-score 0.88
- Q9QUQ5 · AlphaFold monomer V2.0 prediction for short transient receptor potential channel 4… · a predicted model of the same protein · chain C against A, TM-score 0.44
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DP26
- Every structure of UniProt Q9QUQ5
- Elsewhere: RCSB PDB 7CQP · PDBe 7CQP · UniProt P0DP26 · UniProt Q9QUQ5
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