Research workbench
2.0 ångström structure in complex with ca of plant extended synaptotagmin 1, C2A domain
Analyse 2.0 ångström structure in complex with ca of plant extended synaptotagmin 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7ATP
- Type
- protein
- Length
- 129 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Synaptotagmin-1
- UniProt
- Q9SKR2
- Ligands
- CA, ZN, CL
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Synaptotagmin-1 | protein | 129 | 0% helix, 50% strand | Q9SKR2 |
Ligands and binding sites
- CA · Calcium ion · metal · 2 copies · chains A
- ZN · Zinc ion · metal · chains A
- CL · Chloride ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7ATP · 2.0 angstrom structure in complex with Ca of plant Extended Synaptotagmin 1, C2A domain · the same entry in another collection · chain A against A, TM-score 1.00
- Q9SKR2 · AlphaFold monomer V2.0 prediction for synaptotagmin-1 (Q9SKR2) · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9SKR2
- Elsewhere: RCSB PDB 7ATP · PDBe 7ATP · UniProt Q9SKR2
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