GL1X · GenesisL1 explorer

Research workbench

Crystal structure of staphylococcus aureus rsga bound to GDP.

Analyse Crystal structure of staphylococcus aureus rsga bound to GDP. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6ZHM
Type
protein
Length
269 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Small ribosomal subunit biogenesis GTPase rsga
EC
3.6.1.-
UniProt
A0A0H2XJQ2
Ligands
GDP, ZN

Structure

x-ray diffraction · 1 distinct chain · 33% helix, 26% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASmall ribosomal subunit biogenesis GTPase rsga (EC 3.6.1.-)protein26933% helix, 26% strandA0A0H2XJQ2

Ligands and binding sites

  • GDP · Guanosine-5'-diphosphate · ligand · chains A
  • ZN · Zinc ion · metal · chains A
  • EDO · 1,2-ethanediol · additive · 2 copies · chains A
  • PGE · Triethylene glycol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6ZHM · Crystal Structure of Staphylococcus aureus RsgA bound to GDP. · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.