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Cap-binding domain of sftsv L protein

Analyse Cap-binding domain of sftsv L protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6XYA
Type: protein
Length: 112 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: RNA-dependent RNA polymerase
UniProt: F1BV96
Ligands: MGP, NA

Structure

x-ray diffraction · 1 distinct chain · 13% helix, 49% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B	RNA-dependent RNA polymerase	protein	112	13% helix, 49% strand	F1BV96

Ligands and binding sites

MGP · 7-methyl-guanosine-5'-triphosphate · ligand · chains B
NA · Sodium ion · metal · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6XYA · Cap-binding domain of SFTSV L protein · the same entry in another collection · chain B against B, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt F1BV96
Elsewhere: RCSB PDB 6XYA · PDBe 6XYA · UniProt F1BV96

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