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Adducts formed after 3 weeks in the reaction of CHLORIDO[CHLORIDO(2, 2'-((2-([2,2':6',2''-terpyridin]-4'-YLOXY)ETHYL)AZANEDIYL)BIS(ETHAN- 1-OL))PLATINUM(II)] with hewl

Analyse Adducts formed after 3 weeks in the reaction of CHLORIDO[CHLORIDO(2… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6WX5
Type: protein
Length: 129 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lysozyme
EC: 3.2.1.17
UniProt: B8YK79
Ligands: NA, PT
Pockets: 1 · best druggability 0.32

Structure

x-ray diffraction · 1 distinct chain · 41% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lysozyme (EC 3.2.1.17)	protein	129	41% helix, 11% strand	B8YK79

Ligands and binding sites

NA · Sodium ion · metal · chains A
PT · Platinum (II) ion · metal · chains A
ACT · Acetate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	55	0.32	0.77	16	empty

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

6WX5 · Adducts formed after 3 weeks in the reaction of… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B8YK79
Elsewhere: RCSB PDB 6WX5 · PDBe 6WX5 · UniProt B8YK79

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