Research workbench
Crystal structure of arginine repressor P115Q mutant from the pathogenic bacterium corynebacterium pseudotuberculosis bound to arginine
Analyse Crystal structure of arginine repressor P115Q mutant from the pathogenic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6WJP
- Type
- protein
- Length
- 159 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Arginine repressor
- UniProt
- D9QA55
- Ligands
- ARG
Structure
x-ray diffraction · 2 distinct chains · 39% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Arginine repressor | protein | 80 | 41% helix, 28% strand | D9QA55 |
| B | Arginine repressor | protein | 79 | 37% helix, 28% strand | D9QA55 |
Ligands and binding sites
- ARG · Arginine · ligand · 2 copies · chains A, B
- ACT · Acetate ion · additive · chains A
- GOL · Glycerol · additive · chains B
- TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 646 Ų buried · 14 hydrogen bonds · protein-protein
Compared structures
- 6WJP · Crystal structure of Arginine Repressor P115Q mutant from the pathogenic bacterium… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D9QA55
- Elsewhere: RCSB PDB 6WJP · PDBe 6WJP · UniProt D9QA55
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