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The crystal structure of a single chain H2B-H2A histone chimera from xenopus laevis

Analyse The crystal structure of a single chain H2B-H2A histone chimera from xenopus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6W4L
Type
protein
Length
176 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Histone H2B 1.1,HISTONE H2A type 1
UniProt
P02281, P06897
Ligands
PPV

Structure

x-ray diffraction · 1 distinct chain · 72% helix, 5% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AHistone H2B 1.1,HISTONE H2A type 1protein17672% helix, 5% strandP02281, P06897

Ligands and binding sites

  • PPV · Pyrophosphate · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6W4L · The crystal structure of a single chain H2B-H2A histone chimera from Xenopus laevis · the same entry in another collection · chain A against A, TM-score 1.00
  • P06897 · AlphaFold monomer V2.0 prediction for histone H2A type 1 (P06897) · a predicted model of the same protein · chain A against A, TM-score 0.47

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