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Structure of CSCBM6-3 from clostridium stercorarium in complex with cellobiose

Analyse Structure of CSCBM6-3 from clostridium stercorarium in complex with cellobiose in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1O8S
Type
protein
Length
131 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Putative endo-xylanase
EC
3.2.1.8
UniProt
Q93AQ5
Ligands
BGC, CA

Structure

x-ray diffraction · 1 distinct chain · 0% helix, 55% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
APutative endo-xylanase (EC 3.2.1.8)protein1310% helix, 55% strandQ93AQ5

Ligands and binding sites

  • BGC · beta-D-glucopyranose · sugar · 2 copies · chains A
  • CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 1O8S · Structure of CsCBM6-3 from Clostridium stercorarium in complex with cellobiose · the same entry in another collection · chain A against A, TM-score 1.00

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