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TPX2 residues 7-20 fused to aurora a residues 116-389 with C290 disulfide bonded to compound 8-34, and in complex with AMP-pnp

Analyse TPX2 residues 7-20 fused to aurora a residues 116-389 with C290 disulfide… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6VPM
Type
protein
Length
554 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q9ULW0, O14965
Ligands
AMP, R74, MG

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein277—Q9ULW0, O14965

Ligands and binding sites

  • AMP · Adenosine monophosphate · ligand · 2 copies · chains A, B
  • R74 · N~2~-[(2H-1,3-benzodioxol-5-yl)acetyl]-N-[(pyridin-4-yl)methyl]-L-cysteinamide · ligand · 2 copies · chains A, B
  • MG · Magnesium ion · metal · 2 copies · chains A, B
  • MLA · Malonic acid · additive · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6VPM · TPX2 residues 7-20 fused to Aurora A residues 116-389 with C290 disulfide bonded to… · the same entry in another collection · chain A against A, TM-score 1.00
  • O14965 · AlphaFold monomer V2.0 prediction for aurora kinase a (O14965) · a predicted model of the same protein · chain A against A, TM-score 0.87
  • Q9ULW0 · AlphaFold monomer V2.0 prediction for targeting protein for XKLP2 (Q9ULW0) · a predicted model of the same protein · chain A against A, TM-score 0.14

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